Insertion junction: CLIP2.021171_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021171
Chromosome:chromosome 5
Location:3364025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232750 CNK4 NimA-related protein kinase; (1 of 1) PTHR24361//PTHR24361:SF311 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCAGAACGCCAACCGGCGACCCAACACCTACAAGCTGCTGCTGCTT
Internal bar code:TTTTTCTAGGAGCGAGTTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTTCTTAGGCAGTTCCC
Suggested primer 2:GTGAGGAGGAAAGGAGTGCC