Insertion junction: CLIP2.021174_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021174
Chromosome:chromosome 1
Location:6438589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045600 SRR12 (1 of 1) PTHR24363//PTHR24363:SF0 - SERINE/THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED; Speract/scavenger receptor, transmembrane glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCACAACACTACCCGGCCAAAGCTTGGCTATGAGCATGCGTTCTTGA
Internal bar code:TTGAAGGATGCGGCGGCACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2974
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGGTTGCTCTCAAGGC
Suggested primer 2:ATCTAGCCCACTCCTCACGT