Insertion junction: CLIP2.021181_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021181
Chromosome:chromosome 3
Location:3726427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169050 (1 of 1) PTHR12183//PTHR12183:SF18 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // RING-TYPE UBIQUITIN E3 LIGASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTGACGCCCGCCGCCGCCGCGCGCTCCGCCGCCCGTTGGCGCCGCAC
Internal bar code:TTCGTGACTCTTTATAGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1697
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTCGTCCTCGACATCC
Suggested primer 2:CGCCGCTTGCACTTCTTATC