Insertion junction: CLIP2.021181_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021181
Chromosome:chromosome 3
Location:3727225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169050 (1 of 1) PTHR12183//PTHR12183:SF18 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // RING-TYPE UBIQUITIN E3 LIGASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTTGTCCGGGTAGGTCATGGTGGGGTGGGAGGGCTGAAACTTGCACAG
Internal bar code:TTCGTGACTCTTTATAGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:6347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGCTTGCACTTCTTATC
Suggested primer 2:CTGCTTCGTCCTCGACATCC