Insertion junction: CLIP2.021185_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021185
Chromosome:chromosome 4
Location:1604599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213150 MAE13 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTACCCCTTCCACCCATCCATGGAACCCCCCGCTGGCTCCCCTCCAC
Internal bar code:CGGTGCAGTGGGTCACCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGAGGGGTATGTGTCT
Suggested primer 2:TCACCGTACAGGAACAGCAC