Insertion junction: CLIP2.021186_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021186
Chromosome:chromosome 16
Location:7441793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681238 (1 of 1) K03650 - tRNA modification GTPase [EC:3.6.-.-] (mnmE, trmE, MSS1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGGCTTACCGCTGGGAGCCCCGCCGCCGGGGGTGGAGGTGGAGCAAG
Internal bar code:TAACATCATTTATTCTGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3882
LEAP-Seq percent confirming:98.6667
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTGCAAGATGCTGCTCA
Suggested primer 2:CGGGCAGAAGTATCGAGGAC