Insertion junction: CLIP2.021191_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021191
Chromosome:chromosome 2
Location:6678558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387134 (1 of 3) PF04379 - Protein of unknown function (DUF525) (DUF525) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCGGTGCGGCACTCACTCGAAGCAGTCGTTCGGCGGGATGATGGGC
Internal bar code:TCTGGGACCTATTCCGTCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1968
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTTCCAAGGTCTCATGT
Suggested primer 2:AGCATACCACACTGCGTTGA