Insertion junction: CLIP2.021219_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021219
Chromosome:chromosome 17
Location:555426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699550 (1 of 37) IPR008979 - Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCACGGCCGTGCAGGTGGTTGCTCGTCGCCGCGAGCTGCTGGCCCTGC
Internal bar code:GGACAGCCTGTAAGGGGTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3538
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTTGATCAGGCGAGGCG
Suggested primer 2:GCTCAATGATGCAGCTCAGC