Insertion junction: CLIP2.021219_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021219
Chromosome:chromosome 17
Location:555471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699550 (1 of 37) IPR008979 - Galactose-binding domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGTACAACATTCTGTGTGAACGGCAAGCATCACTGCAGAGTGTGCA
Internal bar code:GGACAGCCTGTAAGGGGTCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3141
LEAP-Seq percent confirming:42.3077
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAATGATGCAGCTCAGC
Suggested primer 2:ATACTTGATCAGGCGAGGCG