Insertion junction: CLIP2.021221_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.021221
Chromosome:chromosome 4
Location:1372664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214504 (1 of 1) IPR000095//IPR001190//IPR008979//IPR017448 - CRIB domain // SRCR domain // Galactose-binding domain-like // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGATCCCCATCCCCACACCAGGCAACCGCTTCACCGGCCCGCTGCCG
Internal bar code:GGTTTTGATTTTGTTGATCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGATGCACTGAAGACTG
Suggested primer 2:GTTCGTGTGTTTTGGTCCCG