Insertion junction: CLIP2.021222_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021222
Chromosome:chromosome 12
Location:5845767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533300 SRE2 Pre-mRNA splicing factor, SR-related; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGTGACTGGTGGGGCGATGGCGGTGATGCGCACAAGCGCCTCCCTGT
Internal bar code:AAGCAGTAGGGACACGAAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTCGCTGAACCACCTTC
Suggested primer 2:CCATCCAAACACCTCCTCCC