Insertion junction: CLIP2.021223_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021223
Chromosome:chromosome 2
Location:7113621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390171 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCAGCGACCGCGCGGCCTCAACGCCGACCGAGCCGTCCATAGTGGGG
Internal bar code:CGTTAGGTAGTCTATTGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1828
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAACGTGAAGCCGCATCG
Suggested primer 2:AATGCGCAGTGGAGAAGACA