Insertion junction: CLIP2.021225_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021225
Chromosome:chromosome 9
Location:5241463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407050 MMP24 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCTCGGACTTACTAAACGGGTGCTCTAACCAACTGAGCTATAAGTGC
Internal bar code:TCCTCGATTTTCATGCAATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2187
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAATCCCTGGTCATGGGC
Suggested primer 2:AGCAGCGCTGATTTTTGTGG