Insertion junction: CLIP2.021227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021227
Chromosome:chromosome 6
Location:1561723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261050 (1 of 28) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTCAACTGACCCGCCTCGCTCCCTGCATGCCTCACCCTCACGAACTGC
Internal bar code:TTCTTATATCCGAAGGCACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATTCAACCGCCCTTCCT
Suggested primer 2:TGATGGTAGGGACTGGGGAG