Insertion junction: CLIP2.021228_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021228
Chromosome:chromosome 2
Location:974159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00054624

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGGCCATACCGTGCAAAGCGACCAGTTGATGCTCAGTCGGCCAGCCG
Internal bar code:TGGTCGTAACCTGGGGCTGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3608
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCTCGAGGCTTCCAAA
Suggested primer 2:TATGGTGGGGAACGCTGAAC