Insertion junction: CLIP2.021228_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021228
Chromosome:chromosome 2
Location:974165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00054624

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTCTGCATGCGCCATATTCGTTGTGTGGCCAGTTCTATGCGTGTCC
Internal bar code:CCTATAAATGCAACAACAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2577
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGTGGGGAACGCTGAAC
Suggested primer 2:ACATGCTCGAGGCTTCCAAA