Insertion junction: CLIP2.021230_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021230
Chromosome:chromosome 10
Location:6047606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461750 DMC5 Putative DNA methylase; (1 of 1) PF00145//PF12047 - C-5 cytosine-specific DNA methylase (DNA_methylase) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTCACGCCTTCCCATGGGCTGATGTAACCCGCACGTGCCCCGCTAG
Internal bar code:TGCAGGGTTTGCAGGAATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACACAGACGCACCTTG
Suggested primer 2:TCGCTTTTTGTTGCAGTCGG