Insertion junction: CLIP2.021232_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021232
Chromosome:chromosome 6
Location:8202268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306150 (1 of 1) IPR000104//IPR004919 - Antifreeze protein, type I // Domain of unknown function DUF262 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTCTCCTGCCTCAACGGCCGCGGCATGGACCTGACGGTGGTGGACAA
Internal bar code:AGGGCATCTGTTCACGTACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2656
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGGCATGCAAAGCACTG
Suggested primer 2:GTGGTTGAAGTGGTTGTGGC