Insertion junction: CLIP2.021234_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021234
Chromosome:chromosome 7
Location:557625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g316400 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGGACGTTCAGAACCGTTCACACGCAATCGCTCCGCAGGGCGGCCAC
Internal bar code:TCGAAGTTACGTTGTGTCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGTGACCCAACGCTTG
Suggested primer 2:GGTTTGGCTAGGGACAGGAC