Insertion junction: CLIP2.021238_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021238
Chromosome:chromosome 3
Location:2315514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157950 (1 of 1) IPR011989//IPR011990//IPR016024 - Armadillo-like helical // Tetratricopeptide-like helical domain // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCTACATGCAAGCACGGCTCTATGCGCCCCGCACAACCTGCACAACT
Internal bar code:CGACATACTGTGCCGTGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1702
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCCTGTTGCTCCTCTC
Suggested primer 2:CTTGTGAGAGAAGGCTGGGG