Insertion junction: CLIP2.021240_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021240
Chromosome:chromosome 10
Location:4169891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449020 (1 of 1) 2.6.1.57//2.6.1.7 - Aromatic-amino-acid transaminase // Kynurenine--oxoglutarate transaminase / Kynurenine--oxoglutarate aminotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGGCCTCTGGGGGGCGGGAGGCAGGGAGGCAGGAGGGCGGGAGGC
Internal bar code:CCTGCCTTAACAACCCTTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1146
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCAGTCTACCTTCCGGA
Suggested primer 2:GGAACAAGGTATTCACGCGC