Insertion junction: CLIP2.021246_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021246
Chromosome:chromosome 7
Location:3655967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337450 GT90F9,GT90-9,CGL75 Glycosyl transferase GT90 family protein 9; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCTGCTGCTCAACACGGCGGGTGAGGCGGCGGCGGAGGGGGGGAGA
Internal bar code:TCCTGGATAGTGTTTCATGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTACATCACCTACCCGCT
Suggested primer 2:GGCAGTAGCAGCAGGACTAG