Insertion junction: CLIP2.021248_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021248
Chromosome:chromosome 6
Location:8392063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307950 MRPL9,bL9m Mitochondrial ribosomal protein L9; (1 of 1) IPR000244//IPR009027//IPR020069//IPR020070 - Ribosomal protein L9 // Ribosomal protein L9/RNase H1, N-terminal // Ribosomal protein L9, C-terminal // Ribosomal protein L9, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGCACCCGAACCCGCCAGCCCACCCCCGCCAGTTACCGCCCCAGTAC
Internal bar code:AAGATGACATTATTGAACTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2492
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TACAGGAGGTGGGGTAGAGC
Suggested primer 2:TTCTCGCCCAAAACACCTGT