Insertion junction: CLIP2.021285_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021285
Chromosome:chromosome 9
Location:1498990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED 5'UTR
Cre09.g399601 (1 of 15) IPR029057 - Phosphoribosyltransferase-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAAGAGGCGTGTGCGGGGCTGCCTGCAGATGGTGCAACACCGCTTCT
Internal bar code:TGCTTATTAAATTTCGCGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3336
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGCTTTTTGTCACCACAG
Suggested primer 2:CCATGACGCGATGAAAGCTG