Insertion junction: CLIP2.021287_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021287
Chromosome:chromosome 9
Location:5788732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411150 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCGGGTCTGGGCAAGGACCCGGCAGAGAGCGAGGGTGGCACGCACC
Internal bar code:GGGGCCTTCAGTTTGCGTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGCTTTCGCGTATTCTG
Suggested primer 2:ATGGACGCATACAGGTGCAA