Insertion junction: CLIP2.021289_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021289
Chromosome:chromosome 3
Location:8181970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200400 (1 of 1) PTHR30383 - PERIPLASMIC BROAD-SPECIFICITY ESTERASE/LIPASE/PROTEASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGAAGTCATAGCATAGCGTAGCGCCGGAAGCCCTAATGCGCGTGAG
Internal bar code:AAACCGTGCGAGGAGAAAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1494
LEAP-Seq percent confirming:82.0513
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCAGAAACCCCATGTCC
Suggested primer 2:TTTTCTCCTCGGGGTGAACG