Insertion junction: CLIP2.021293_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021293
Chromosome:chromosome 16
Location:730011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691050 (1 of 1) PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAGCACACGCTGAGCCGAACCCAACGCACAAGGGCAAGGAGGTGGTGA
Internal bar code:TACCTCGGAGCCTGTGCCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCTGAAAGGAAGGGAGG
Suggested primer 2:ACTCGTACTTCCAGGGCTCT