Insertion junction: CLIP2.021294_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021294
Chromosome:chromosome 8
Location:526740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359500 (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGAGGTAGGGCAAAAACTAAGACACACAGCCCAGCCCAGCCCCAGC
Internal bar code:TGTCGCGTCTAGGTTCAGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1753
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCCACCAACACACACA
Suggested primer 2:GCGTAGGACAGTGTATGCGA