Insertion junction: CLIP2.021296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021296
Chromosome:chromosome 1
Location:2813459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017350 RMT3 Putative protein N-methyltransferase; (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain intron
Cre01.g017400 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAGTATCCAGAACTGCTCCCGAATAAGCTGTTAGCATGTGGAGGGCG
Internal bar code:GCGCTAACGAGTATTTCTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:147
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:147

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGCGCAATCAACCTCA
Suggested primer 2:TGCCTGACACCCCAAGTTTT