Insertion junction: CLIP2.021305_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021305
Chromosome:chromosome 6
Location:5411951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285600 MID,RWP5 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCGCCGTACCGCCGCGGCGCCCTCGCAGCCATCCGCCGGCGGCACCA
Internal bar code:CAAAAGTTAAATGTCCTGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4024
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:104
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACAACACCACAACTCAC
Suggested primer 2:CTGCTCGTAGTACTGCGGAG