Insertion junction: CLIP2.021320_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.021320
Chromosome:chromosome 3
Location:8885505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205585 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCGACCCCCCCCCCCTTCACTCTCTGTGCCAGCGGTCCGATCTGCGA
Internal bar code:AATTGTTTTCTTGCGGACTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1430
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCACCTCGCAAAGACCAT
Suggested primer 2:ACAAGGCAGAGGCAGATGAC