Insertion junction: CLIP2.021329_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021329
Chromosome:chromosome 1
Location:5060845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035250 (1 of 1) PTHR21549:SF0 - COILED-COIL DOMAIN-CONTAINING PROTEIN 112 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTGGATGGGCTCGGGAGCCCCCGTGTGTCTTTGATCTTCACCTACCT
Internal bar code:CGCTATAGATGTAAATCATCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1449
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGCCATGCTACTACCGG
Suggested primer 2:TACCCTTGCAAGCGAGAAGG