Insertion junction: CLIP2.021342_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021342
Chromosome:chromosome 6
Location:8429089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g308300 RRM6 (1 of 2) IPR002877//IPR029063 - Ribosomal RNA methyltransferase FtsJ domain // S-adenosyl-L-methionine-dependent methyltransferase; Putative ribosomal RNA methyltransferase of the RrmJ/FtsJ family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCATTGGTTACAAGAGGGACCTGCTGACGCAGTTCTTTCAGGAGATT
Internal bar code:TAGTGGATTCGAGGTTATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTAAGACGCTTGGTTCC
Suggested primer 2:TTTCATCATTACCGCCGCCT