Insertion junction: CLIP2.021345_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021345
Chromosome:chromosome 5
Location:836225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246100 (1 of 1) IPR019887 - Transcription regulator AsnC-type, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGCGATTTAAACAAAACTCGTACTTGGGGGGGGGGGGTGTGCTACG
Internal bar code:TGCAGATATGCTTGTGTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTGTAGTTGATGCATGG
Suggested primer 2:GGAAGAGGGTGGGTGAATGG