Insertion junction: CLIP2.021345_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021345
Chromosome:chromosome 5
Location:836226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246100 (1 of 1) IPR019887 - Transcription regulator AsnC-type, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCAGTGAAATGTCCCCCCCCTCTAGCTCCCAGCGCAAGCACGCACGC
Internal bar code:TGCAGATATGCTTGTGTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGAGGGTGGGTGAATGG
Suggested primer 2:GCGCTGTAGTTGATGCATGG