Insertion junction: CLIP2.021350_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021350
Chromosome:chromosome 3
Location:2675084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160850 (1 of 2) PTHR35100:SF1 - F15H11.13 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGGGCTGGGAGCCATTGCTGGCCTTGTTAGGAACCGAAAGCTTTGG
Internal bar code:TGCGTAGTTGGTGGCGGCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGACACCTACTCTCGGA
Suggested primer 2:CTCCACCACTTCCACGTACC