Insertion junction: CLIP2.021358_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021358
Chromosome:chromosome 3
Location:887119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146507 SPT2 (1 of 2) 2.3.1.50 - Serine C-palmitoyltransferase; Serine palmitoyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAGAAAGAGCCCCTCGGCGTGGACCGTGGCGCCACCATGCCGGGCCA
Internal bar code:CACATCCAAGCCCCGTCTCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2022
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCACTCGGATTTCCAC
Suggested primer 2:TACTTTGAGGTCCGCACCAC