Insertion junction: CLIP2.021378_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021378
Chromosome:chromosome 14
Location:2645988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625450 VTE3 MPBQ/MSBQ methyltransferase, chloroplastic; (1 of 1) 2.1.1.295 - 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase / MPBQ/MSBQ methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCGCGGCGTGCGGCGGCACGGACTCATCATGGGCTGCTCAGTCACAG
Internal bar code:TTACTTATTTCACGGTGAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2981
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTGTGTTTGAGCCTG
Suggested primer 2:CCCGTCTTTCACTGATGGCT