Insertion junction: CLIP2.021385_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021385
Chromosome:chromosome 16
Location:597616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692200 MMP6 (1 of 1) IPR003609//IPR008752 - PAN/Apple domain // Peptidase M11, gametolysin; Metalloproteinase of VMP family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTCTTTGTTACACGTACTGGCAGATCAAGGATGGGTGTTGGTGGGG
Internal bar code:GCTGTTTGGGGACCTAATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1579
LEAP-Seq percent confirming:92.2078
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCACCTGCAAGTGTCGT
Suggested primer 2:TGCTGGACGAGTTCAAGGAC