Insertion junction: CLIP2.021390_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021390
Chromosome:chromosome 9
Location:1479597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00140651

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGAGGGGCCAACCGGGAGGCTACGAGGGCACAGGTCGGGGGCCCAAA
Internal bar code:ATCATCCAGGTGCACGCCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:891
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAAGTCCAACACCAGCG
Suggested primer 2:TCACGAGTTTTCCCGGAGTG