Insertion junction: CLIP2.021390_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021390
Chromosome:chromosome 9
Location:1479612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00140651

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGACTCGATCCCTGTAGTGCCAAGTTTGGGGCTTACAACGTGGGACGT
Internal bar code:TGACAGGTAATGTGTAAAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGAGTTTTCCCGGAGTG
Suggested primer 2:CACAAAGTCCAACACCAGCG