Insertion junction: CLIP2.021396_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021396
Chromosome:chromosome 12
Location:6018219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534500 (1 of 1) PTHR20955//PTHR20955:SF1 - UNCHARACTERIZED // PROTEIN JAGUNAL HOMOLOG 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCACCTCCCAATCGCAGGTCCACAGCCACGCAGCACACCCGCACACAC
Internal bar code:TATGGTGTCGTAAAGGATTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCTGGGCCCTTGCAAGG
Suggested primer 2:GGTTGGTTGGGTAGGTAGGC