Insertion junction: CLIP2.021406_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021406
Chromosome:chromosome 1
Location:4118597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027350 TMG10 (1 of 2) PTHR12029:SF11 - METHYLTRANSFERASE TARBP1-RELATED; tRNA (guanosine-2'-O)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACTTCACAGGTGAGCGAAACACTTTCAATTATGCAACATAATGCAGC
Internal bar code:GCGACTCGGTAAATGTTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCTCCGAATCAGCTACC
Suggested primer 2:CTGTGATTGCAGCGAGATGC