Insertion junction: CLIP2.021409_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021409
Chromosome:chromosome 6
Location:3428407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278098 MCCA,MCC1 Methylcrotonoyl-CoA carboxylase alpha subunit; (1 of 2) 6.4.1.4 - Methylcrotonoyl-CoA carboxylase / Methylcrotonyl-CoA carboxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGCCCACTGCCCGGCACCTTTCTGTGCCCACCGCCTGCCTGCCGGC
Internal bar code:GCGTCGCTTCGACGCAAAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:211
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCTCACTTGCCCTCTCA
Suggested primer 2:CCTTAGCCTCCTCCCAAAGC