Insertion junction: CLIP2.021428_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.021428
Chromosome:chromosome 5
Location:2629617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239978 (1 of 1) PTHR36116//PTHR36116:SF1 - FAMILY NOT NAMED // UPF0060 MEMBRANE PROTEIN YNFA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGGAAGAGTGAGTGGCGGTCCGCGGTCACGTGCGCAGCGCCAGGGG
Internal bar code:GTTAAAGATTCGGTGTGAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TACATCCGACCCCACTAGCA
Suggested primer 2:AGTCGCCTGTATCGGGTTTG