Insertion junction: CLIP2.021432_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021432
Chromosome:chromosome 7
Location:4712089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACCTCTGTGTGGTGGCCGGGTGCGTGGGCAAGAGCTCGGACTGGGGTC
Internal bar code:TCCCTGGTAGTTTTGCTGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1223
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGAAAAAGGCACAAGCG
Suggested primer 2:AAACACGAAGCGTTGCTGAC