Insertion junction: CLIP2.021434_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021434
Chromosome:chromosome 9
Location:3450043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00132499

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGACCGCCGATGGCACAGCGTCGGTCGTCCCCAAAAAGGGGTCCCC
Internal bar code:TTACCCGTTGCGACTAATTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4196
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:CATACTGCAACGCCATGCTC
Suggested primer 2:TAACGTTCTGTGGGGTTCCG