Insertion junction: CLIP2.021449_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021449
Chromosome:chromosome 2
Location:4873314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109650 GSP1 Gamete-specific plus 1; (1 of 2) IPR001356//IPR008422//IPR009057 - Homeobox domain // Homeobox KN domain // Homeodomain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGTGCCAACGTATGCTTGCAACAGCAAAGCAGGAGCAGCAGGCACCA
Internal bar code:AGTCTTGGGCGTGTGAGATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1503
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTCACAAGCACCTACT
Suggested primer 2:AGAGGAGGCTGAGGAAGGAG