Insertion junction: CLIP2.021479_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021479
Chromosome:chromosome 12
Location:39379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483550 VPE1 (1 of 1) K01369 - legumain (LGMN); Vacuolar processing enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGAGCGGCGCCGGCGATAAATGTCCACCCCCCGGCTCGGTGGCGCGC
Internal bar code:CTAGTGGGTCAGCCCGAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:962
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGGAAAGCGTGTGTGC
Suggested primer 2:GTGCTGCTGAATGCGAAACA