Insertion junction: CLIP2.021480_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021480
Chromosome:chromosome 10
Location:3861331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446100 TRX6,TRXY,TRXY1 Thioredoxin y, chloroplastic; (1 of 1) PTHR10438:SF280 - THIOREDOXIN Y1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGATGGACACGATCAAGGAATTCTCCATTTTGAGATCTACATACGTTC
Internal bar code:GTACTGAGGACATTTTATTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:98.7654
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGCGCTCGTGTACATG
Suggested primer 2:TGGTGGACTTCTACGCAACC